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1C39

STRUCTURE OF CATION-DEPENDENT MANNOSE 6-PHOSPHATE RECEPTOR BOUND TO PENTAMANNOSYL PHOSPHATE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]277
Detector technologyIMAGE PLATE
Collection date1998-01-10
DetectorRIGAKU RAXIS II
Spacegroup nameP 1 21 1
Unit cell lengths42.840, 79.310, 55.570
Unit cell angles90.00, 100.33, 90.00
Refinement procedure
Resolution40.000 - 1.850
R-factor0.21
Rwork0.210
R-free0.24600
Structure solution methodMOLECULAR REPLACEMEN
Starting model (for MR)1m6p
RMSD bond length0.006
RMSD bond angle25.700

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.900
High resolution limit [Å]1.8501.850
Rmerge0.0510.292
Total number of observations48273

*

Number of reflections28822

*

<I/σ(I)>13.5
Completeness [%]88.462.3
Redundancy1.71.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6.5

*

19

*

pH 6.40
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropmPEG500025 (%(w/v))precipitant
31dropammonium acetate0.2 (M)precipitant
41dropcacodylate 0.1 (M)precipitant

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PDB entries from 2026-01-14

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