1BZW
PEANUT LECTIN COMPLEXED WITH C-LACTOSE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 293 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 129.121, 126.748, 76.900 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 2.700 |
R-factor | 0.188 |
Rwork | 0.188 |
R-free | 0.22700 |
Structure solution method | OTHER |
Starting model (for MR) | PDB2PEL WITHOUT SUGAR AND WATER |
RMSD bond length | 0.008 |
RMSD bond angle | 1.600 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.700 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.129 | 0.461 |
Total number of observations | 124179 * | |
Number of reflections | 33099 | |
<I/σ(I)> | 14.2 | 2.33 |
Completeness [%] | 93.8 | 93.8 |
Redundancy | 3.75 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | HANGING DROP OF 5 MG/ML PROTEIN IN 0.05 M SODIUM PHOSPHATE BUFFER,PH 7.0, CONTAINING 0.2M SODIUM CHLORIDE, 0.02 % SODIUM AZIDE, 10MM C-LACTOSE AND 12% (W/V) PEG 8000 IN THE SAME BUFFER, vapor diffusion - hanging drop |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 5 (mg/ml) | |
10 | 1 | reservoir | sodium azide | 0.02 (%) | |
11 | 1 | reservoir | C-lactose | 10 (mM) | |
2 | 1 | drop | sodium phosphate | 0.05 (M) | |
3 | 1 | drop | 0.2 (M) | ||
4 | 1 | drop | sodium azide | 0.02 (%) | |
5 | 1 | drop | C-lactose | 10 (mM) | |
6 | 1 | drop | PEG8000 | 12 (%(w/v)) | |
7 | 1 | reservoir | PEG8000 | 40 (%(w/v)) | |
8 | 1 | reservoir | sodium phosphate | 0.05 (M) | |
9 | 1 | reservoir | 0.2 (M) |