Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1BO4

CRYSTAL STRUCTURE OF A GCN5-RELATED N-ACETYLTRANSFERASE: SERRATIA MARESCENS AMINOGLYCOSIDE 3-N-ACETYLTRANSFERASE

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F2
Synchrotron siteCHESS
BeamlineF2
Temperature [K]100
Detector technologyCCD
Collection date1998-05-15
Wavelength(s)0.9793, 0.9703, 0.9668
Spacegroup nameC 1 2 1
Unit cell lengths78.540, 102.260, 50.140
Unit cell angles90.00, 93.73, 90.00
Refinement procedure
Resolution15.000 - 2.300
R-factor0.201
Rwork0.201
R-free0.25000
Structure solution methodMAD
RMSD bond length0.007
RMSD bond angle24.000

*

Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareSHARP
Refinement softwareCNS (0.3C)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.420
High resolution limit [Å]2.3002.300
Rmerge0.052

*

0.093

*

Total number of observations118408

*

Number of reflections16291
<I/σ(I)>7.66.4
Completeness [%]92.992.9
Redundancy7.37.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.84

*

SITTING DROP, 4 DEGREES C, 3.5MG/ML PROTEIN + 5MM COA, 100MM TRIS-HCL PH7.8, 0.8% PEG4K, 18% T-BUTANOL, 20MM SRCL2, 7% DIOXANE, 5% 2,4-METHYLPENTANEDIOL, 40MM HEXANEDIOL, 10MM DITHIOTHREITOL, 2MM TRIS(2-CARBOXY- ETHYL)PHOSPHINE-HCL, 10MM SPERMIDINE, 2.5% GLYCEROL, vapor diffusion - sitting drop, temperature 277K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein3.5 (mg/ml)
101reservoirdithiothreitol10 (mM)
111reservoirtri(2-carboxyethyl)phosphine-HCl2 (mM)
121reservoirspermidine10 (mM)
131reservoirglycerol2.5 (%)
21dropCoA5 (mM)
31reservoirTris-HCl100 (mM)
41reservoirPEG40000.8 (%)
51reservoirt-butanol18 (%)
61reservoir20 (mM)
71reservoirdioxane7 (%)
81reservoirMPD50 (%)
91reservoirhexanediol40 (mM)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon