1BM1
CRYSTAL STRUCTURE OF BACTERIORHODOPSIN IN THE LIGHT-ADAPTED STATE
Experimental procedure
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-18B |
Synchrotron site | Photon Factory |
Beamline | BL-18B |
Temperature [K] | 285 |
Detector technology | IMAGE PLATE |
Collection date | 1996-11-14 |
Detector | FUJI |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 104.700, 104.700, 114.100 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 8.000 - 3.500 |
R-factor | 0.269 * |
Rwork | 0.260 |
R-free | 0.31100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2brd |
RMSD bond length | 0.009 |
RMSD bond angle | 20.076 * |
Data reduction software | WEIS |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | X-PLOR (3.851) |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.650 |
High resolution limit [Å] | 3.500 | 3.500 |
Rmerge | 0.103 | 0.159 |
Number of reflections | 4000 | |
Completeness [%] | 80.2 | 45.2 |
Redundancy | 7.4 | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 5.2 | 278 * | pH 5.2 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | ammonium sulfate | 2.0 (M) | |
2 | 1 | reservoir | sodium citrate | 0.08 (M) |