Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1B65

Structure of l-aminopeptidase d-ala-esterase/amidase from ochrobactrum anthropi, a prototype for the serine aminopeptidases, reveals a new variant among the ntn hydrolase fold

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsLURE BEAMLINE DW32
Synchrotron siteLURE
BeamlineDW32
Temperature [K]294
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 21 21 2
Unit cell lengths156.970, 96.220, 154.410
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution12.500 - 1.820
R-factor0.169

*

Rwork0.169
R-free0.20600
Structure solution methodMIR
RMSD bond length0.013
RMSD bond angle0.034
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCCP4
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]12.500
High resolution limit [Å]1.8201.820

*

Rmerge0.081

*

0.288

*

Total number of observations473750

*

Number of reflections56600
Completeness [%]95.891.9

*

Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

9294

*

pH 9.0
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21reservoirPEG2000 MME13-16 (%(w/v))
31reservoirbicine100 (mM)
41reservoir1 (M)

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon