1B65
Structure of l-aminopeptidase d-ala-esterase/amidase from ochrobactrum anthropi, a prototype for the serine aminopeptidases, reveals a new variant among the ntn hydrolase fold
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LURE BEAMLINE DW32 |
Synchrotron site | LURE |
Beamline | DW32 |
Temperature [K] | 294 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 156.970, 96.220, 154.410 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 12.500 - 1.820 |
R-factor | 0.169 * |
Rwork | 0.169 |
R-free | 0.20600 |
Structure solution method | MIR |
RMSD bond length | 0.013 |
RMSD bond angle | 0.034 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CCP4 |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 12.500 | |
High resolution limit [Å] | 1.820 | 1.820 * |
Rmerge | 0.081 * | 0.288 * |
Total number of observations | 473750 * | |
Number of reflections | 56600 | |
Completeness [%] | 95.8 | 91.9 * |
Redundancy | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 9 | 294 * | pH 9.0 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 20 (mg/ml) | |
2 | 1 | reservoir | PEG2000 MME | 13-16 (%(w/v)) | |
3 | 1 | reservoir | bicine | 100 (mM) | |
4 | 1 | reservoir | 1 (M) |