1B3E
HUMAN SERUM TRANSFERRIN, N-TERMINAL LOBE, EXPRESSED IN PICHIA PASTORIS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 277 |
Detector technology | IMAGE PLATE |
Collection date | 1996-05 |
Detector | RIGAKU RAXIS IIC |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 73.500, 73.500, 156.700 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.000 - 2.500 |
R-factor | 0.177 * |
Rwork | 0.177 |
R-free | 0.25500 |
Structure solution method | OTHER |
Starting model (for MR) | 1A8F (HUMAN TRANSFERRIN N-LOBE) |
RMSD bond length | 0.010 |
RMSD bond angle | 1.800 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.066 | 0.245 |
Number of reflections | 15238 | |
<I/σ(I)> | 17 | 4.2 |
Completeness [%] | 96.9 | 96 |
Redundancy | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.25 | 4 * | PROTEIN WAS CRYSTALLIZED FROM 40% (V/V) ETHANOL WITH 50MM SODIUM CACODYLATE, PH 6.25. GROWN IN SITTING DROPS AT 277 K. RESERVOIRS CONTAINED 40% (V/V) ETHANOL, 50MM SODIUM CACODYLATE, PH 5.8 - 6.3. PRIOR TO CRYSTALLIZATION, THE PROTEIN WAS DIALYSED AGAINST SODIUM BICARBONATE, PH 8.1, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 2 | 40% (V/V) ETHANOL WITH 50MM SODIUM CACODYLATE, PH 6.25. | ||
2 | 1 | 2 | 0% (V/V) ETHANOL, 50MM SODIUM CACODYLATE,PH 5.8 - 6.3. |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 80 (mg/ml) | |
2 | 1 | drop | sodium bicarbonate | 150 (mM) | |
3 | 1 | reservoir | ethanol | 40 (%(v/v)) | |
4 | 1 | reservoir | sodium cacodylate | 50 (mM) |