1B25
FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE FROM PYROCOCCUS FURIOSUS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-1 |
Synchrotron site | SSRL |
Beamline | BL9-1 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1996-04 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 100.340, 170.850, 180.640 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.850 |
R-factor | 0.174 * |
Rwork | 0.174 |
R-free | 0.22000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1aor |
RMSD bond length | 0.080 |
RMSD bond angle | 22.900 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.880 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.074 * | 0.234 * |
Total number of observations | 928734 * | |
Number of reflections | 240510 | |
<I/σ(I)> | 14 | 2.6 |
Completeness [%] | 91.4 | 83.6 |
Redundancy | 3.8 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | melting-point capillary method * | 5.6 | pH 5.6 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | protein | 55-65 (mg/ml) | |
2 | 1 | 1 | Tris-HCl | 50 (mM) | |
3 | 1 | 1 | dithionite | 2.0 (mM) | |
4 | 1 | 1 | dithiothreitol | 2 (mM) | |
5 | 1 | 1 | 0.2 (M) | ||
6 | 1 | 2 | glycerol | 30 (%(v/v)) | |
7 | 1 | 2 | PEG4000 | 20 (%(w/v)) | |
8 | 1 | 2 | sodium citrate | 0.1 (M) | |
9 | 1 | 2 | 0.2 (M) |