1B0G
CLASS I HISTOCOMPATIBILITY ANTIGEN (HLA-A2.1)/BETA 2-MICROGLOBULIN/PEPTIDE P1049 COMPLEX
Replaces: 1A9KExperimental procedure
Experimental method | MONOCHROMATIC |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 1997-05-15 |
Detector | RIGAKU RAXIS IIC |
Spacegroup name | P 1 |
Unit cell lengths | 50.090, 62.890, 74.680 |
Unit cell angles | 81.98, 76.18, 77.86 |
Refinement procedure
Resolution | 30.000 - 2.500 |
R-factor | 0.26 |
Rwork | 0.255 |
R-free | 0.30400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hhj |
RMSD bond length | 0.008 |
RMSD bond angle | 1.905 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.083 | 0.176 |
Total number of observations | 77499 * | |
Number of reflections | 29804 | |
<I/σ(I)> | 16.6 | 6.5 |
Completeness [%] | 90.9 | 70.8 |
Redundancy | 2.6 | 1.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | PROTEIN WAS CRYSTALLIZED IN THE HANGING DROP VAPOR DIFFUSION METHOD. THE RESERVOIR SOLUTION CONTAINED 12-16% PEG6000, 6% DIOXANE IN 25MM MES BUFFER, PH6.5. THE HANGING DROP WAS A 1:1 MIXTURE OF THE RESERVOIR SOLUTION AND THE PROTEIN SOLUTION WHICH CONTAINED 10MG/ML PROTEIN IN 25MM MES BUFFER, PH6.5., vapor diffusion - hanging drop |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | MES BUFFER | ||
2 | 1 | 1 | PEG 6000 | ||
3 | 1 | 1 | DIOXANE | ||
4 | 1 | 2 | MES BUFFER | ||
5 | 1 | 2 | PEG 6000 | ||
6 | 1 | 2 | DIOXANE |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG6000 | 12-16 (%) | |
2 | 1 | reservoir | dioxane | 6 (%) | |
3 | 1 | reservoir | MES | 25 (mM) | pH6.5 |
4 | 1 | drop | protein | 10 (mg/ml) | |
5 | 1 | drop | MES | 25 (mM) | pH6.5 |