1ATK
CRYSTAL STRUCTURE OF THE CYSTEINE PROTEASE HUMAN CATHEPSIN K IN COMPLEX WITH THE COVALENT INHIBITOR E-64
Experimental procedure
Source type | ROTATING ANODE |
Source details | SIEMENS |
Temperature [K] | 287 |
Detector technology | AREA DETECTOR |
Collection date | 1995-10-25 |
Detector | SIEMENS |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.400, 50.700, 104.900 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 7.000 - 2.200 |
R-factor | 0.215 |
Rwork | 0.215 |
R-free | 0.31000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 9pap |
RMSD bond length | 0.007 |
RMSD bond angle | 22.800 * |
Data reduction software | XENGEN |
Data scaling software | XENGEN |
Phasing software | X-PLOR (3.1) |
Refinement software | X-PLOR (3.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.340 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.095 | 0.190 |
Total number of observations | 33493 * | |
Number of reflections | 10418 | |
<I/σ(I)> | 14 | 2.94 |
Completeness [%] | 95.0 | 80 |
Redundancy | 3.2 | 2.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 6.2 | 20 * | PROTEIN CRYSTALLIZED FROM 10% PEG 8000, 0.1 M NA/K PHOSPHATE AT PH 6.2 CONTAINING 0.2 M NACL AT ROOM TEMPERATURE BY VAPOR DIFFUSION., vapor diffusion |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 8 (mg/ml) | |
2 | 1 | reservoir | PEG8000 | 10 (%) | |
3 | 1 | reservoir | sodium potassium phosphate | 0.1 (M) | |
4 | 1 | reservoir | 0.2 (M) |