Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1AKE

STRUCTURE OF THE COMPLEX BETWEEN ADENYLATE KINASE FROM ESCHERICHIA COLI AND THE INHIBITOR AP5A REFINED AT 1.9 ANGSTROMS RESOLUTION: A MODEL FOR A CATALYTIC TRANSITION STATE

Experimental procedure
Spacegroup nameP 21 2 21
Unit cell lengths73.200, 79.800, 85.000
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 1.900

*

R-factor0.196
Rwork0.196
RMSD bond length0.016
RMSD bond angle3.200
Phasing softwareX-PLOR
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]9999.000

*

High resolution limit [Å]1.850

*

1.850

*

Rmerge0.147

*

0.805

*

Total number of observations156159

*

Number of reflections40700

*

7170

*

Completeness [%]94.1

*

92.8

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

6.7

*

20

*

referred to J.Mol.Biol. 202.909-912 1988

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20-25 (mg/ml)
21dropAp5A2 (mM)
31dropMES50 (mM)
41dropPEG15001.5 (%(w/v))
51dropammonium sulfate1.5 (M)
61reservoirMES50 (mM)
71reservoirammonium sulfate2.0-2.2 (M)

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon