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1A3D

PHOSPHOLIPASE A2 (PLA2) FROM NAJA NAJA VENOM

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]22
Detector technologyAREA DETECTOR
Collection date1993-01
DetectorXUONG-HAMLIN MULTIWIRE
Spacegroup nameP 21 3
Unit cell lengths69.240, 69.240, 69.240
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution6.000 - 1.800
R-factor0.175
Rwork0.175
R-free0.23000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1psh
RMSD bond length0.017
RMSD bond angle23.200

*

Data reduction softwareUCSD (SOFTWARE)
Data scaling softwareUCSD
Phasing softwareX-PLOR (3.0)
Refinement softwareX-PLOR (3.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]23.0601.880
High resolution limit [Å]1.800

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1.800
Rmerge0.060

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Total number of observations97743

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Number of reflections10508
<I/σ(I)>12.62
Completeness [%]95.2

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90.1
Redundancy9.78.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.522.5

*

1.4M (NH4)2SO4, 1% PEG 400, AND 0.1M TRIS PH 7.5 AT 22.5 DEGREES C., temperature 295.5K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate1.4 (M)
21reservoirPEG4001 (%)
31reservoirTris-HCl0.1 (M)

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PDB entries from 2024-04-17

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