1A04
THE STRUCTURE OF THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL IN THE MONOCLINIC C2 CRYSTAL FORM
Experimental procedure
| Source type | ROTATING ANODE |
| Source details | RIGAKU |
| Temperature [K] | 93 |
| Detector technology | IMAGE PLATE |
| Collection date | 1995-07-27 |
| Detector | RIGAKU |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 156.306, 38.527, 106.892 |
| Unit cell angles | 90.00, 131.91, 90.00 |
Refinement procedure
| Resolution | 8.000 - 2.200 |
| R-factor | 0.211 |
| Rwork | 0.211 |
| R-free | 0.26700 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1rnl |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.360 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | X-PLOR (3.1) |
| Refinement software | X-PLOR (3.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 65.000 | 2.440 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.078 | |
| Number of reflections | 22871 | |
| <I/σ(I)> | 9.8 | |
| Completeness [%] | 99.9 | 99.3 |
| Redundancy | 5.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.6 | 4 * | THE PROTEIN SOLUTION CONTAINING 23.3 MG/ML OF PURIFIED NARL, 20 MM TRIS.HCL (PH=7.6), 0.5 MM MGCL2, AND 10% GLYCEROL WAS MIXED WITH AN EQUAL VOLUME OF THE RESERVOIR SOLUTION CONTAINING 0.1 M TRIS.HCL (PH=8.5), 0.2 M SODIUM ACETATE, AND 30% POLYETHYLENE GLYCOL (PEG) 4000. SITTING DROPS CONTAINING 20 ML OF MIXTURE WERE EQUILIBRATED BY VAPOR DIFFUSION AT 4 DEGREES AGAINST 20 ML OF THE RESERVOIR SOLUTION. CRYSTALS BEGAN TO APPEAR AS CLUSTERS OF PLATES AFTER 11-15 DAYS., vapor diffusion - sitting drop, temperature 277K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | NarL | 11.65 (mg/ml) | |
| 10 | 1 | reservoir | PEG4000 | 30 (%) | |
| 2 | 1 | drop | Tris-HCl | 10 (mM) | |
| 3 | 1 | drop | 0.25 (mM) | ||
| 4 | 1 | drop | glycerol | 5 (%) | |
| 5 | 1 | drop | Tris-HCl | 0.05 (M) | |
| 6 | 1 | drop | sodium acetate | 0.1 (M) | |
| 7 | 1 | drop | PEG4000 | 15 (%) | |
| 8 | 1 | reservoir | Tris-HCl | 0.1 (M) | |
| 9 | 1 | reservoir | sodium acetate | 0.2 (M) |






