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1YY8

Crystal structure of the Fab fragment from the monoclonal antibody cetuximab/Erbitux/IMC-C225

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X9B
Synchrotron siteNSLS
BeamlineX9B
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths64.400, 82.000, 211.400
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution15.000 - 2.000
Rwork0.224
R-free0.26390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)pdb ids 1IBG 1ad9
RMSD bond length0.012
RMSD bond angle1.764
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0730.297
Number of reflections73414
<I/σ(I)>12.75.5
Completeness [%]95.60.968
Redundancy8.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5Ammonium sulfate, pH 6.5, VAPOR DIFFUSION, HANGING DROP

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PDB entries from 2024-05-15

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