Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YTH

SIV PROTEASE CRYSTALLIZED WITH PEPTIDE PRODUCT

Experimental procedure
Source typeSYNCHROTRON
Source detailsSSRL
Synchrotron siteSSRL
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Spacegroup nameP 21 21 21
Unit cell lengths51.100, 59.300, 61.400
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution7.000 - 2.200
R-factor0.198
Rwork0.198
R-free0.28300
RMSD bond length0.014
RMSD bond angle27.000

*

Data reduction softwareDENZO
Phasing softwareX-PLOR
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
High resolution limit [Å]2.200

*

Rmerge0.080
Number of reflections9700
Completeness [%]96.093

*

Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

5.4

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate42-50 (%sat)
21reservoirsodium acetate200 (mM)
31reservoirdithiothreitol1 (mM)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon