1VUB
CCDB, A TOPOISOMERASE POISON FROM E. COLI
Experimental procedure
Source type | ROTATING ANODE |
Source details | RIGAKU RUH2R |
Temperature [K] | 300 |
Detector technology | IMAGE PLATE |
Collection date | 1993-08 |
Detector | MARRESEARCH |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 104.520, 104.520, 88.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 10.000 - 2.600 |
R-factor | 0.199 |
Rwork | 0.199 |
R-free | 0.24600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PRELIMINARY MIR MODEL IN DIFFERENT CRYSTAL FORM |
RMSD bond length | 0.010 |
RMSD bond angle | 26.198 * |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((ROTAVATA)) |
Phasing software | X-PLOR (3.851) |
Refinement software | X-PLOR (3.851) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 10.000 | 2.700 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.098 * | 0.333 * |
Total number of observations | 101106 * | |
Number of reflections | 14825 * | |
<I/σ(I)> | 22.2 | 2.89 |
Completeness [%] | 93.0 | 77.6 |
Redundancy | 6.82 | 5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.5 | Dao-Thi, M.H., (1997) Acta Crystallog. sect D., 54, 975. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6.0-12.0 (mg/ml) | |
2 | 1 | drop | ammonium sulfate | 0.8-2.0 (M) | |
3 | 1 | drop | agarose | 0-2 (%) |