1VM8
Crystal structure of UDP-N-acetylglucosamine pyrophosphorylase (Agx2) from Mus musculus at 2.50 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-06-05 |
Detector | ADSC |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.094, 73.402, 107.132 |
Unit cell angles | 90.00, 99.83, 90.00 |
Refinement procedure
Resolution | 29.110 - 2.500 |
R-factor | 0.20971 |
Rwork | 0.207 |
R-free | 0.26573 |
Structure solution method | MAD |
RMSD bond length | 0.014 |
RMSD bond angle | 1.417 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (4.2)) |
Phasing software | SHARP |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.110 | 2.640 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 42134 | |
<I/σ(I)> | 9.5 | 2.7 |
Completeness [%] | 99.3 | 96.9 |
Redundancy | 3.4 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 6.5 | 277 | 1.6M (NH4)2SO4, 0.1M Cacodylate pH 6.5, 0.2M NaCl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 6.5 | 277 | 1.6M (NH4)2SO4, 0.1M Cacodylate pH 6.5, 0.2M NaCl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 6.5 | 277 | 1.6M (NH4)2SO4, 0.1M Cacodylate pH 6.5, 0.2M NaCl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |