1VLP
Crystal structure of a putative nicotinate phosphoribosyltransferase (yor209c, npt1) from saccharomyces cerevisiae at 1.75 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-01-08 |
Detector | ADSC |
Spacegroup name | P 1 |
Unit cell lengths | 54.406, 83.103, 107.237 |
Unit cell angles | 97.35, 95.67, 97.99 |
Refinement procedure
Resolution | 48.240 - 1.750 |
R-factor | 0.17163 |
Rwork | 0.170 |
R-free | 0.20962 |
Structure solution method | MAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.544 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELXCD |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.810 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.075 | 0.451 |
Number of reflections | 177740 | |
<I/σ(I)> | 18.09 | 1.64 |
Completeness [%] | 96.8 | 90.05 |
Redundancy | 3.79 | 2.23 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 277 | 0.06M MES, 0.04M MES_Na, 14% PEG MME 5000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K | |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 277 | 0.06M MES, 0.04M MES_Na, 14% PEG MME 5000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K | |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 277 | 0.06M MES, 0.04M MES_Na, 14% PEG MME 5000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |