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1VLP

Crystal structure of a putative nicotinate phosphoribosyltransferase (yor209c, npt1) from saccharomyces cerevisiae at 1.75 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2004-01-08
DetectorADSC
Spacegroup nameP 1
Unit cell lengths54.406, 83.103, 107.237
Unit cell angles97.35, 95.67, 97.99
Refinement procedure
Resolution48.240 - 1.750
R-factor0.17163
Rwork0.170
R-free0.20962
Structure solution methodMAD
RMSD bond length0.018
RMSD bond angle1.544
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHELXCD
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.810
High resolution limit [Å]1.7501.750
Rmerge0.0750.451
Number of reflections177740
<I/σ(I)>18.091.64
Completeness [%]96.890.05
Redundancy3.792.23
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION,SITTING DROP,NANODROP2770.06M MES, 0.04M MES_Na, 14% PEG MME 5000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
1VAPOR DIFFUSION,SITTING DROP,NANODROP2770.06M MES, 0.04M MES_Na, 14% PEG MME 5000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
1VAPOR DIFFUSION,SITTING DROP,NANODROP2770.06M MES, 0.04M MES_Na, 14% PEG MME 5000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K

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