Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VKY

Crystal structure of S-adenosylmethionine tRNA ribosyltransferase (TM0574) from Thermotoga maritima at 2.00 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
Collection date2003-10-18
DetectorADSC
Spacegroup nameI 2 2 2
Unit cell lengths119.033, 122.843, 131.207
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.390 - 2.000
R-factor0.18107
Rwork0.180
R-free0.21041
Structure solution methodMAD
RMSD bond length0.015
RMSD bond angle1.529
Data reduction softwareMOSFLM
Data scaling softwareSCALA (4.2))
Phasing softwareSOLVE
Refinement softwareREFMAC (5.2.0001)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.3902.110
High resolution limit [Å]2.0002.000
Rmerge0.0730.678
Number of reflections65036
<I/σ(I)>14.82.7
Completeness [%]100.0100
Redundancy7.36.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION,SITTING DROP,NANODROP2950.10M NP_Citrate 1, 4.0% NP_Peg 6000, % NP_PEG 4000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 295K
1VAPOR DIFFUSION,SITTING DROP,NANODROP2950.10M NP_Citrate 1, 4.0% NP_Peg 6000, % NP_PEG 4000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 295K
1VAPOR DIFFUSION,SITTING DROP,NANODROP2950.10M NP_Citrate 1, 4.0% NP_Peg 6000, % NP_PEG 4000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 295K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon