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1VHZ

Crystal structure of ADP compounds hydrolase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 32-ID
Synchrotron siteAPS
Beamline32-ID
Detector technologyCCD
DetectorMARRESEARCH
Wavelength(s)0.9795
Spacegroup nameI 41 3 2
Unit cell lengths191.773, 191.773, 191.773
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.010 - 2.320
Rwork0.182
R-free0.24800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle2.300

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC (4.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.9202.440
High resolution limit [Å]2.3202.320
Rmerge0.1790.338
Number of reflections26224
<I/σ(I)>2613.5
Completeness [%]99.4

*

96

*

Redundancy39.938.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.5

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropHEPES10 (mM)pH7.5
21drop150 (mM)
31dropmethionine10 (mM)
41dropglycerol10 (%)
51dropdithiothreitol5 (mM)
61dropprotein10 (mg/ml)

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PDB entries from 2025-06-11

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