Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VFR

THE MAJOR NAD(P)H:FMN OXIDOREDUCTASE FROM VIBRIO FISCHERI

Experimental procedure
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-6B
Synchrotron sitePhoton Factory
BeamlineBL-6B
Temperature [K]285
Detector technologyIMAGE PLATE
Collection date1995-04
DetectorFUJI
Spacegroup nameC 1 2 1
Unit cell lengths101.600, 63.300, 74.400
Unit cell angles90.00, 100.00, 90.00
Refinement procedure
Resolution10.000 - 1.800
R-factor0.187
Rwork0.187
R-free0.21300
Structure solution methodMULTIPLE ISOMORPHOUS REPLACEMENT
RMSD bond length0.010
RMSD bond angle22.830

*

Data reduction softwareWEIS
Data scaling softwareCCP4
Phasing softwareX-PLOR (3.1)
Refinement softwareX-PLOR (3.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]1.880
High resolution limit [Å]1.8001.790
Rmerge0.0590.297
Total number of observations180543

*

Number of reflections39895

*

<I/σ(I)>2.6
Completeness [%]91.374.4
Redundancy3.33.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

8.525

*

pH 8.5
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21reservoirPEG400030 (%(w/v))
31reservoirsodium acetate0.2 (M)
41reservoirFMN0.1 (mM)
51reservoirTris-HCl100 (mM)

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon