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1V6O

Peanut lectin complexed with 10mer peptide (PVRIWSSATG)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]293
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths128.127, 125.800, 84.740
Unit cell angles90.00, 116.19, 90.00
Refinement procedure
Resolution20.000 - 3.000
R-factor0.174
Rwork0.174
R-free0.24100

*

Structure solution methodIsomorphous replacement
Starting model (for MR)1cr7
RMSD bond length0.010
RMSD bond angle26.500

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0003.100
High resolution limit [Å]3.0003.000
Rmerge0.1670.357
Total number of observations110293

*

Number of reflections431661185

*

Completeness [%]95.594
Redundancy2.62.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

4.629330% PEG 8000, 0.2M Ammonium sulfate and 0.1M cacodylate pH6.5, pH 4.6, hanging drop method, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4.2 (mg/ml)
21dropsodium acetate0.05 (M)
31drop0.2 (M)
41dropsodium azide0.05 (%)
51droplactose2.1 (mM)
61reservoirPEG800012 (%)

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PDB entries from 2024-12-25

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