1UVQ
Crystal structure of HLA-DQ0602 in complex with a hypocretin peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 102.078, 129.304, 40.619 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 * - 1.800 |
R-factor | 0.189 |
Rwork | 0.189 |
R-free | 0.20500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 25.500 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | EPMR |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.850 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.050 | 0.296 * |
Number of reflections | 49489 | |
<I/σ(I)> | 15.9 | 3.6 |
Completeness [%] | 97.3 | 78.7 |
Redundancy | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 3.5 * | pH 3.80 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | Tris-HCl | 10 (mM) | |
2 | 1 | drop | protein | 7 (mg/ml) | |
3 | 1 | reservoir | glycine | 100 (mM) | pH3.5 |
4 | 1 | reservoir | PEG8000 | 16 (%(w/v)) | |
5 | 1 | reservoir | magnesium acetate | 100 (mM) |