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1TJM

Crystallographic Identification of Sr2+ Coordination Site in Synaptotagmin I C2B Domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-C
Synchrotron siteAPS
Beamline14-BM-C
Temperature [K]100
Wavelength(s)0.9
Spacegroup nameP 32 2 1
Unit cell lengths54.644, 54.644, 103.317
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000 - 1.180
R-factor0.15897
Rwork0.158
R-free0.17373
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1k5w
RMSD bond length0.017
RMSD bond angle1.710
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.200
High resolution limit [Å]1.1801.180
Rmerge0.0480.190
Number of reflections56844
<I/σ(I)>31.13.4
Completeness [%]95.556.2
Redundancy10.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5277ammonium sulfate, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K

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PDB entries from 2024-05-15

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