1S3R
Crystal structure of the human-specific toxin intermedilysin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-C |
Synchrotron site | APS |
Beamline | 14-BM-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-07-14 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 88.450, 173.640, 105.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.600 |
R-factor | 0.23233 |
Rwork | 0.229 |
R-free | 0.29510 |
Structure solution method | MIR |
RMSD bond length | 0.018 |
RMSD bond angle | 1.582 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.047 | 0.368 |
Number of reflections | 50420 | |
<I/σ(I)> | 37.7 | 4.5 |
Completeness [%] | 99.2 | 97.6 |
Redundancy | 6 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | PEG 8000, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | PEG 8000, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K |