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1R30

The Crystal Structure of Biotin Synthase, an S-Adenosylmethionine-Dependent Radical Enzyme

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315
Wavelength(s)1.30000, 1.73827, 1.74150
Spacegroup nameP 31 2 1
Unit cell lengths155.690, 155.690, 90.880
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution44.450 - 3.400
R-factor0.256
Rwork0.256
R-free0.30000
Structure solution methodMAD
RMSD bond length0.009
RMSD bond angle22.800

*

Data scaling softwareXDS
Phasing softwareSOLVE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]100.000

*

3.510
High resolution limit [Å]3.4003.400
Rmerge0.066

*

0.259

*

Number of reflections17465
<I/σ(I)>15.793.78
Completeness [%]98.1

*

87.9

*

Redundancy5.4

*

1.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8

*

298Tris, MgCl2, PEG 1000, Glycine, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21dropTris-HCl25 (mM)pH8.0
31reservoirTris-HCl0.1 (M)
41reservoirglycine0.1 (M)
51reservoir0.2 (M)
61reservoirPEG100020 (%(w/v))pH6.5
71reservoir2.5 (M)

238268

PDB entries from 2025-07-02

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