1QWU
Golgi alpha-mannosidase II D341N mutant complex with 5-F-guloside
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.850, 109.799, 138.765 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 * - 2.030 |
R-factor | 0.151 |
Rwork | 0.151 |
R-free | 0.18900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hty |
RMSD bond length | 0.015 |
RMSD bond angle | 1.720 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.160 |
High resolution limit [Å] | 2.030 * | 2.030 |
Rmerge | 0.110 | 0.450 * |
Total number of observations | 476418 * | |
Number of reflections | 68989 * | |
<I/σ(I)> | 16.8 | |
Completeness [%] | 99.9 * | 98.7 * |
Redundancy | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7 | 298 | van den Elsen, J.M., (2001) EMBO J., 20, 3008. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG6000 | 8.5 (%) | |
2 | 1 | reservoir | MPD | 5 (%) | |
3 | 1 | reservoir | Tris | 100 (mM) | pH7.0 |