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1P7G

Crystal structure of superoxide dismutase from Pyrobaculum aerophilum

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X8C
Synchrotron siteNSLS
BeamlineX8C
Temperature [K]100
Detector technologyCCD
Collection date1999-06-11
DetectorADSC QUANTUM 4
Wavelength(s)0.9785, 0.9708, 0.9787, 0.9863
Spacegroup nameP 32
Unit cell lengths163.429, 163.429, 172.169
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution36.450 - 1.800
R-factor0.162
Rwork0.162
R-free0.21700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1SSS
RMSD bond length0.007
RMSD bond angle21.100

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareGLRF
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.400

*

1.860
High resolution limit [Å]1.8001.800
Rmerge0.0760.302
Total number of observations2013670

*

Number of reflections465126
<I/σ(I)>20.13.3
Completeness [%]97.682.6
Redundancy4.31.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5295

*

PEG 3000, calcium acetate, hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG300010-15 (%(v/v))
21reservoirHEPES0.1 (M)pH7.5
31reservoircalcium acetate0.15 (M)
41dropprotein22 (mg/ml)

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PDB entries from 2024-12-25

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