1P4D
F factor TraI Relaxase Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F2 |
Synchrotron site | CHESS |
Beamline | F2 |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2003-02-14 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9713 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 128.219, 128.219, 121.184 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.000 - 2.600 |
R-factor | 0.238 |
Rwork | 0.233 |
R-free | 0.27800 |
Structure solution method | MAD |
RMSD bond length | 0.007 |
RMSD bond angle | 22.800 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SnB |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.760 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.054 * | 0.337 * |
Number of reflections | 34650 | |
<I/σ(I)> | 43.3 | |
Completeness [%] | 96.8 * | 92.3 |
Redundancy | 11.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.25 * | 294 | Larkin, C., (2003) Acta Crystallogr., D59, 1514. * |
1 | VAPOR DIFFUSION, SITTING DROP | 8.25 * | 294 | Larkin, C., (2003) Acta Crystallogr., D59, 1514. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 14 (mg/ml) | |
2 | 1 | drop | Tris | 25 (mM) | pH8.25 |
3 | 1 | drop | EDTA | 0.1 (mM) | |
4 | 1 | drop | beta-mercaptoethanol | 0.5 (mM) | |
5 | 1 | drop | 50 (mM) |