1P3R
Crystal structure of the phosphotyrosin binding domain(PTB) of mouse Disabled 1(Dab1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-12-08 |
Detector | MARRESEARCH |
Wavelength(s) | 1.02466 |
Spacegroup name | H 3 2 |
Unit cell lengths | 128.150, 128.150, 272.300 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 2.100 |
Rwork | 0.223 |
R-free | 0.24600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1m7e |
RMSD bond length | 0.008 |
RMSD bond angle | 1.310 * |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | |
High resolution limit [Å] | 2.100 | 2.300 * |
Rmerge | 0.084 * | |
Total number of observations | 2717217 * | |
Number of reflections | 49672 | |
<I/σ(I)> | 54.7 | |
Completeness [%] | 97.1 | 99.4 * |
Redundancy | 54.7 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 18 * | sodium formate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | HEPES | 20 (mM) | pH7.5 |
2 | 1 | drop | dithiothreitol | 1 (mM) | |
3 | 1 | drop | EDTA | 1 (mM) | |
4 | 1 | drop | protein | 20 (mg/ml) | |
5 | 1 | reservoir | sodium formate | 3.5 (M) | |
6 | 1 | reservoir | HEPES | 50 (mM) | pH8.5 |