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1OY0

The crystal Structure of the First Enzyme of Pantothenate Biosynthetic Pathway, Ketopantoate Hydroxymethyltransferase from Mycobacterium Tuberculosis Shows a Decameric Assembly and Terminal Helix-Swapping

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 32 2 1
Unit cell lengths106.800, 106.800, 224.400
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000

*

- 2.800
Rwork0.239
R-free0.27500
Structure solution methodSAS with averaging
RMSD bond length0.007
RMSD bond angle22.800

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.830
High resolution limit [Å]2.8002.800
Rmerge0.1070.468
Number of reflections36560
<I/σ(I)>8.52.9
Completeness [%]97.8

*

99.1

*

Redundancy4.24.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7298Magnesium formate, ethylene glycol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein7 (mg/ml)
21reservoirmagnesium formate200 (mM)
31reservoirethylene glycol10 (%)

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PDB entries from 2025-12-10

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