1ON3
Transcarboxylase 12S crystal structure: hexamer assembly and substrate binding to a multienzyme core (with methylmalonyl-coenzyme a and methylmalonic acid bound)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X9B |
Synchrotron site | NSLS |
Beamline | X9B |
Temperature [K] | 93 |
Detector technology | IMAGE PLATE |
Collection date | 2002-04-25 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.04 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 114.805, 200.708, 146.347 |
Unit cell angles | 90.00, 102.43, 90.00 |
Refinement procedure
Resolution | 20.000 * - 1.900 |
R-factor | 0.168 |
Rwork | 0.168 |
R-free | 0.21300 |
Structure solution method | MIR |
RMSD bond length | 0.008 |
RMSD bond angle | 1.410 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.970 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.057 * | 0.268 * |
Number of reflections | 240569 | |
<I/σ(I)> | 3.59 | 3.6 |
Completeness [%] | 95.4 | 97.4 |
Redundancy | 2.8 | 2.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 4.5 | 293 | MPD, sodium acetate, cadmium chloride, pH 4.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | MPD | 19-25 (%) | |
2 | 1 | reservoir | sodium acetate | 0.1 (M) | pH4.5 |