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1OHF

The refined structure of Nudaurelia capensis omega virus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]287
Detector technologyFILM
Spacegroup nameP 1
Unit cell lengths413.550, 410.220, 419.670
Unit cell angles59.13, 58.90, 64.04
Refinement procedure
Resolution20.000 - 2.800
R-factor0.219
Rwork0.219
R-free0.22200

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Structure solution methodOTHER
RMSD bond length0.007

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RMSD bond angle25.400

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Data reduction softwarePURDUE (DATA PROCESSING PACKAGE)
Data scaling softwarePURDUE (DATA PROCESSING PACKAGE)
Phasing softwarePURDUE (DATA PROCESSING PACKAGE)
Refinement softwareCNS (1.1)
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]2.800
Rmerge0.121
Number of reflections2465275
Completeness [%]51.0

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

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5

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Cavarelli, J., (1998) Acta Crystallogr., B47, 23.

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirMOPS0.075 (M)pH7.0
21reservoirPEG80002 (%)
31reservoir0.25 (M)
41reservoir0.001 (M)
51dropvirus8-10 (mg/ml)
61dropsodium acetate0.07 (M)pH5.0

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PDB entries from 2024-05-15

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