1OD5
Crystal structure of glycinin A3B4 subunit homohexamer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | MACSCIENCE M18X |
Temperature [K] | 293 |
Detector technology | AREA DETECTOR |
Collection date | 1999-05-15 |
Detector | SIEMENS |
Spacegroup name | H 3 |
Unit cell lengths | 114.842, 114.842, 191.572 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 10.000 - 2.100 |
R-factor | 0.201 |
Rwork | 0.201 |
R-free | 0.25400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fxz |
RMSD bond length | 0.013 |
RMSD bond angle | 3.100 |
Data reduction software | SAINT |
Data scaling software | SAINT |
Phasing software | X-PLOR |
Refinement software | X-PLOR |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.300 | 2.170 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.080 * | 0.447 |
Total number of observations | 227710 * | |
Number of reflections | 55186 | 5597 * |
<I/σ(I)> | 0.08 | 1.92 |
Completeness [%] | 100.0 | 100 |
Redundancy | 4.13 | 2.28 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | unknown * | 4 * | 20 * | pH 5.40 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | protein | 20 (mg/ml) | |
2 | 1 | 2 | MES | pH4.0 | |
3 | 1 | 2 | MPD |