1O9P
Crystal structure of the S131A mutant of Malonamidase E2 complexed with malonate from Bradyrhizobium japonicum
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU300 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Detector | RIGAKU IMAGE PLATE |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 103.581, 94.790, 75.065 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 20.000 - 1.800 |
| R-factor | 0.192 |
| Rwork | 0.192 |
| R-free | 0.22600 |
| Structure solution method | DIRECT METHODS |
| Starting model (for MR) | 1GR9 |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.291 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | CNS |
| Refinement software | CNS (1.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 1.840 |
| High resolution limit [Å] | 1.800 * | 1.780 |
| Rmerge | 0.053 * | 0.198 * |
| Total number of observations | 514152 * | |
| Number of reflections | 71433 | |
| <I/σ(I)> | 22.23 | 4 |
| Completeness [%] | 94.3 | 84.7 |
| Redundancy | 4 | 2.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion * | 7 | 20% POLYETHYLENE GLYCOL 1000, 100 MM TRIS, PH 7.0, 15 MM MALONATE |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 10 (mg/ml) | |
| 2 | 1 | reservoir | PEG1000 | 20 (%) | |
| 3 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH7.0 |






