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1NZV

Crystal Structure of Src SH2 domain bound to doubly phosphorylated peptide PQpYIpYVPA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]200
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths100.256, 67.727, 29.636
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000

*

- 2.100
Rwork0.224
R-free0.27300

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1sps
RMSD bond length0.008
RMSD bond angle24.200

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]2.000

*

2.040

*

Rmerge0.104

*

0.340

*

Total number of observations162554

*

Number of reflections14205

*

Completeness [%]90.480.4

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8296PEG 4000, magnesium chloride,Hepes, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 296K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein60 (mg/ml)
21reservoirPEG400034 (%)
31reservoirHEPES0.1 (M)pH8.0
41reservoir0.2 (M)

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PDB entries from 2024-12-25

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