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1NZL

Crystal Structure of Src SH2 domain bound to doubly phosphorylated peptide PQpYEpYIPI

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]200
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths100.321, 68.455, 29.732
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000

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- 1.900
R-factor0.223
Rwork0.223
R-free0.26300

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1sps
RMSD bond length0.006
RMSD bond angle23.800

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]1.9001.890

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Rmerge0.069

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0.163

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Total number of observations205689

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Number of reflections17153
Completeness [%]97.493.2

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8296PEG 4000,magnesium chloride, hepes, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 296K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein60 (mg/ml)
21reservoirPEG400034 (%)
31reservoirHEPES0.1 (M)pH8.0
41reservoir0.2 (M)

220113

PDB entries from 2024-05-22

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