1NKK
COMPLEX STRUCTURE OF HCMV PROTEASE AND A PEPTIDOMIMETIC INHIBITOR
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-BM |
| Synchrotron site | APS |
| Beamline | 19-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2002-04-09 |
| Detector | CUSTOM-MADE |
| Wavelength(s) | 0.97799 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 105.170, 215.250, 52.330 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 20.000 * - 2.600 |
| R-factor | 0.233 |
| Rwork | 0.233 |
| R-free | 0.28000 |
| Structure solution method | COMO |
| RMSD bond length | 0.007 |
| RMSD bond angle | 23.200 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | COMO |
| Refinement software | CNS (1.0) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 20.000 | 2.590 |
| High resolution limit [Å] | 2.600 * | 2.500 |
| Rmerge | 0.099 * | |
| Total number of observations | 103436 * | |
| Number of reflections | 38225 | |
| Completeness [%] | 91.0 | 82.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 21 * | PEG 4000, HEPES, EDTA, Sodium Chloride, Sodium Sulfate, DTT, Spermine_HCl, Glycerol, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 7 (mg/ml) | |
| 10 | 1 | reservoir | glycerol | 10-12 (%) | |
| 11 | 1 | reservoir | 0.3 (M) | ||
| 12 | 1 | reservoir | spermine-HCl | 5 (mM) | |
| 13 | 1 | reservoir | dithiothreitol | 2 (mM) | |
| 14 | 1 | reservoir | EDTA | 2 (mM) | |
| 2 | 1 | drop | HEPES | 20 (mM) | pH7.0 |
| 3 | 1 | drop | 80 (mM) | ||
| 4 | 1 | drop | 40 (mM) | ||
| 5 | 1 | drop | dithiothreitol | 2 (mM) | |
| 6 | 1 | drop | EDTA | 2 (mM) | |
| 7 | 1 | drop | DMF | 2 (mM) | |
| 8 | 1 | reservoir | PEG4000 | 16-18 (%) | |
| 9 | 1 | reservoir | HEPES | 0.1 (M) | pH7.0 |






