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1MZ8

CRYSTAL STRUCTURES OF THE NUCLEASE DOMAIN OF COLE7/IM7 IN COMPLEX WITH A PHOSPHATE ION AND A ZINC ION

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL17B2
Synchrotron siteNSRRC
BeamlineBL17B2
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.29004
Spacegroup nameP 21 21 2
Unit cell lengths119.735, 62.410, 74.137
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000

*

- 2.000
R-factor0.183
Rwork0.183
R-free0.24100

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7cei
RMSD bond length0.016

*

RMSD bond angle1.660

*

Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.061

*

0.278

*

Total number of observations169490

*

Number of reflections36897
<I/σ(I)>21.75.5
Completeness [%]96.196.1
Redundancy4.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.3298PEG4000, sodium phosphate, ammonium acetate, pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21dropphosphate50 (mM)pH6.3
31dropammonium acetate0.35 (M)
41dropPEG400011 (%)
51reservoirPEG400022.5 (%)

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PDB entries from 2024-12-25

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