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1MD6

High resolution crystal structure of murine IL-1F5 reveals unique loop conformation for specificity

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Temperature [K]100
Detector technologyCCD
Collection date2002-02-28
DetectorADSC QUANTUM 4
Wavelength(s)0.934
Spacegroup nameP 32 2 1
Unit cell lengths78.932, 78.932, 69.740
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.500 - 1.600
Rwork0.204
R-free0.21200

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2mib
RMSD bond length0.005
RMSD bond angle1.400
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwareAMoRE
Refinement softwareCNS (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.5001.580
High resolution limit [Å]1.580

*

1.500
Rmerge0.078

*

0.478
Number of reflections40560

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<I/σ(I)>18.93.7
Completeness [%]100.0100
Redundancy6.57.0

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.518

*

ammomium sulphate, HEPES, potassium chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein5 (mg/ml)
21reservoir0.1 (M)
31reservoirHEPES0.1 (M)pH7.5
41reservoirammonium sulfate1.3 (M)

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PDB entries from 2025-02-05

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