1MD2
CHOLERA TOXIN B-PENTAMER WITH DECAVALENT LIGAND BMSC-0013
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-BM |
| Synchrotron site | APS |
| Beamline | 19-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2000-11-30 |
| Detector | CUSTOM-MADE |
| Wavelength(s) | 0.9789 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 102.124, 66.176, 78.221 |
| Unit cell angles | 90.00, 106.33, 90.00 |
Refinement procedure
| Resolution | 25.000 - 1.450 |
| Rwork | 0.125 |
| R-free | 0.16400 * |
| Structure solution method | isomorphous to 3CHB |
| Starting model (for MR) | 3chb |
| RMSD bond length | 0.018 * |
| RMSD bond angle | 0.035 |
| Data reduction software | TRUNCATE |
| Data scaling software | CCP4 ((TRUNCATE)) |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.450 |
| High resolution limit [Å] | 1.450 * | 1.450 * |
| Rmerge | 0.048 * | 0.306 * |
| Number of reflections | 81475 * | 5338 * |
| <I/σ(I)> | 18 | 1.4 |
| Completeness [%] | 92.0 * | 54 * |
| Redundancy | 3 | 1.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | PEG 1000, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature rtK |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 5.0 (mg/ml) | |
| 2 | 1 | drop | Tris-HCl | 100 (mM) | pH7.5 |
| 3 | 1 | drop | ligand 12 | 0.25 (mM) | |
| 4 | 1 | reservoir | 50 (mM) | ||
| 5 | 1 | reservoir | Tris-HCl | 100 (mM) | pH7.5 |
| 6 | 1 | reservoir | PEG1000 | 40 (%) |






