1M32
Crystal Structure of 2-aminoethylphosphonate Transaminase
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-03-04 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9790, 0.9791, 0.95 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.600, 155.300, 168.600 |
Unit cell angles | 90.00, 90.60, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.200 |
R-factor | 0.17 |
Rwork | 0.166 |
R-free | 0.20000 |
Structure solution method | MAD |
RMSD bond length | 0.005 |
RMSD bond angle | 1.200 |
Data reduction software | DENZO |
Data scaling software | CCP4 ((TRUNCATE)) |
Phasing software | AMoRE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 * | 2.230 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.037 | 0.152 |
Total number of observations | 496002 * | |
Number of reflections | 264452 | |
<I/σ(I)> | 15.5 | |
Completeness [%] | 96.8 | 83 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 4 * | ammonium acetate, sodium citrate, mmPEG5K, PLP, phosphate, DTT, phosphonoacetaldehyde, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 4 * | ammonium acetate, sodium citrate, mmPEG5K, PLP, phosphate, DTT, phosphonoacetaldehyde, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 * | 4 * | ammonium acetate, sodium citrate, mmPEG5K, PLP, phosphate, DTT, phosphonoacetaldehyde, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | ammonium acetate | 0.2 (M) | |
2 | 1 | reservoir | sodium citrate | 0.1 (M) | pH6.0 |
3 | 1 | reservoir | PEG5000 MME | 10-13 (%) | |
4 | 1 | drop | protein | 18 (mg/ml) | |
5 | 1 | drop | phosphate | 8 (mM) | pH7.5 |
6 | 1 | drop | dithiothreitol | 0.8 (mM) | |
7 | 1 | drop | phosphonoacetaldehyde | 20 (mM) |