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1LX7

Structure of E. coli uridine phosphorylase at 2.0A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X9A
Synchrotron siteNSLS
BeamlineX9A
Temperature [K]100
Detector technologyCCD
Collection date2001-11-15
DetectorMARRESEARCH
Wavelength(s)0.9794
Spacegroup nameH 3
Unit cell lengths151.375, 151.375, 48.151
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution20.000

*

- 2.000
R-factor0.182

*

Rwork0.182
R-free0.21500
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle1.200
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (0.9)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.860
High resolution limit [Å]2.000

*

2.000

*

Rmerge0.038

*

0.080

*

Total number of observations747216

*

Number of reflections49742

*

Completeness [%]89.2

*

78.6

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8

*

2910.1M Mes, 10% PEG 4K, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTris-HCl10 (mM)pH8.
31drop50 (mM)
41dropdithiothreitol1 (mM)
51reservoirPEG400010 (%)
61reservoirMES0.1 (M)pH6.5
71reservoirglycerol5 (%)

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PDB entries from 2024-05-15

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