1LAJ
The Structure of Tomato Aspermy Virus by X-Ray Crystallography
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X12B |
| Synchrotron site | NSLS |
| Beamline | X12B |
| Temperature [K] | 298 |
| Detector technology | IMAGE PLATE |
| Collection date | 1997-04-01 |
| Detector | MARRESEARCH |
| Wavelength(s) | 1.15000 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 294.296, 327.393, 382.066 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.000 - 3.400 |
| Rwork | 0.218 |
| R-free | 0.22800 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1f15 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 29.300 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | X-PLOR |
| Refinement software | X-PLOR (3.851) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.720 | 3.460 |
| High resolution limit [Å] | 3.400 | 3.400 |
| Rmerge | 0.230 | |
| Total number of observations | 1444765 * | |
| Number of reflections | 156468 | |
| <I/σ(I)> | 7.9 | |
| Completeness [%] | 62.0 * | 2.2 |
| Redundancy | 1.522 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 18 * | 14-17% Ethanol, 100mM tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 18 * | 14-17% Ethanol, 100mM tris, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 14 (mg/ml) | pH8.5 |
| 2 | 1 | drop | ethanol | 14-17 (%) | |
| 3 | 1 | drop | Tris | 100 (mM) | |
| 4 | 1 | reservoir | Tris | 100 (mM) | pH8.5 |
| 5 | 1 | reservoir | MPD | 20 (%) | |
| 6 | 1 | reservoir | ethanol | 10 (%) | |
| 7 | 1 | reservoir | sodium azide | 0.04 (%) |






