1L9B
X-Ray Structure of the Cytochrome-c(2)-Photosynthetic Reaction Center Electron Transfer Complex from Rhodobacter sphaeroides in Type II Co-Crystals
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2001-03-18 |
| Detector | ADSC QUANTUM 4 |
| Wavelength(s) | 1.10 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 78.222, 115.650, 79.677 |
| Unit cell angles | 90.00, 110.29, 90.00 |
Refinement procedure
| Resolution | 50.000 * - 2.400 |
| R-factor | 0.22 * |
| Rwork | 0.220 |
| R-free | 0.26400 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | PDB ID Code 1AIJ and 1CXC are starting models for the reaction center and cytochrome c2 respectively. |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.300 * |
| Data reduction software | MOSFLM |
| Data scaling software | CCP4 ((SCALA)) |
| Phasing software | CNS |
| Refinement software | CNS |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.730 | 2.530 |
| High resolution limit [Å] | 2.400 | 2.400 |
| Rmerge | 0.100 * | 0.326 * |
| Total number of observations | 196158 * | |
| Number of reflections | 50331 | |
| <I/σ(I)> | 4.6 | 2.1 |
| Completeness [%] | 96.8 | 83.7 |
| Redundancy | 3.9 | 3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 19 * | 10% PEG 4000, 0.06%(w/v) lauryldimethylamine-N-oxide, 3.9%(w/v) heptane-1,2,3-triol, 15 mM Tricine, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 292K |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 7.7 (mg/ml) | |
| 2 | 1 | drop | cytochrome c2 | 2 (mg/ml) | |
| 3 | 1 | drop | PEG4000 | 10 (%(w/v)) | |
| 4 | 1 | drop | LDAO | 0.06 (%(w/v)) | |
| 5 | 1 | drop | heptanetriol | 3.9 (%(w/v)) | |
| 6 | 1 | drop | Tricine | 15 (mM) | pH8.5 |
| 7 | 1 | reservoir | PEG4000 | 22 (%(w/v)) | |
| 8 | 1 | reservoir | Tricine | 50 (mM) | pH8.5 |






