1L2L
Crystal structure of ADP-dependent glucokinase from a Pyrococcus Horikoshii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-6A |
Synchrotron site | Photon Factory |
Beamline | BL-6A |
Temperature [K] | 280 |
Detector technology | CCD |
Collection date | 2001-04-30 |
Detector | ADSC QUANTUM 4 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.760, 74.730, 99.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.930 - 2.000 |
R-factor | 0.213 |
Rwork | 0.213 |
R-free | 0.28000 * |
Structure solution method | SIRAS |
RMSD bond length | 0.006 |
RMSD bond angle | 21.500 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.060 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.090 * | 0.418 * |
Number of reflections | 275056 * | |
Completeness [%] | 99.1 * | 97.1 * |
Redundancy | 8.3 * | 3.48 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 3.6 | 20 * | PEG6000, LiSO4, pH 3.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | PEG6000 | 9-13 (%) | |
3 | 1 | reservoir | 0.2 (M) | ||
4 | 1 | reservoir | citrate | 0.1 (M) | pH3.6 |