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1KQX

Crystal structure of apo-CRBP from zebrafish

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]100
Detector technologyCCD
Collection date2001-09-15
DetectorADSC QUANTUM 4
Wavelength(s)0.9393
Spacegroup nameI 4
Unit cell lengths88.759, 88.759, 38.437
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.060 - 1.700
R-factor0.2032
Rwork0.195
R-free0.27600

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Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)holo rat CRBPII
RMSD bond length0.007
RMSD bond angle1.900

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Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Phasing softwareSHELX
Refinement softwareSHELXL-97
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.000

*

1.790
High resolution limit [Å]1.7001.700
Rmerge0.0940.294
Total number of observations143455

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Number of reflections16261

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<I/σ(I)>4.62.1
Completeness [%]97.797.7

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Redundancy3.42.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.64

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PEG 4000, Ammonium acetate, sodium citrate, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirPEG400030 (%(w/v))
21reservoirsodium citrate0.1 (M)
31reservoirammonium acetate0.2 (M)pH5.6
41dropprotein8.0 (mg/ml)

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PDB entries from 2024-05-15

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