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1KLX

Helicobacter pylori cysteine rich protein B (hcpB)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Wavelength(s)0.9791, 0.9794, 0.8856
Spacegroup nameP 65 2 2
Unit cell lengths51.360, 51.360, 205.941
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000 - 1.950
R-factor0.19232
Rwork0.187
R-free0.23840

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Structure solution methodMAD
RMSD bond length0.040
RMSD bond angle2.438
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareREFMAC (5.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.001
High resolution limit [Å]1.9501.950
Rmerge0.054

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Number of reflections12049
Completeness [%]99.8

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49.8

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Redundancy9.3

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.5

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20

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PEG 8000, sodium citrate, pH 3, VAPOR DIFFUSION, SITTING DROP, temperature 293K
1VAPOR DIFFUSION, SITTING DROP5.5

*

20

*

PEG 8000, sodium citrate, pH 3, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4.4 (mg/ml)
21dropsodium acetate40 (mM)
31dropEDTA1 (mM)pH5.5
41reservoirPEG800025 (%)
51reservoirsodium citrate0.1 (M)pH3.0

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PDB entries from 2024-05-15

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