1KGB
structure of ground-state bacteriorhodopsin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-05-29 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97 |
Spacegroup name | P 63 |
Unit cell lengths | 60.987, 60.987, 109.131 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 1.650 |
R-factor | 0.177 * |
Rwork | 0.130 |
R-free | 0.25300 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1c3w |
RMSD bond length | 0.017 |
RMSD bond angle | 0.034 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.700 |
High resolution limit [Å] | 1.650 | 1.650 |
Rmerge | 0.036 | 0.358 |
Number of reflections | 26695 | |
<I/σ(I)> | 32.8 | 3.2 |
Completeness [%] | 98.7 | 96.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | unknown * | 5.6 | 3.0M Na/K Phosphate, pH 5.6, mono-olein cubic phase, temperature 100K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | 1 | OG | 2 (%) | |
2 | 1 | 1 | sodium potassium phosphate | 3.0 (M) | pH5.6 |