1KDD
X-ray structure of the coiled coil GCN4 ACID BASE HETERODIMER ACID-d12La16I BASE-d12La16L
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4A |
Synchrotron site | NSLS |
Beamline | X4A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2000-07-19 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0093 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 86.278, 86.278, 78.864 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 * - 2.140 |
R-factor | 0.252 * |
Rwork | 0.252 |
R-free | 0.30220 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | calculated structure |
RMSD bond length | 0.004 |
RMSD bond angle | 13.100 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 | 2.120 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.060 | 0.257 |
Number of reflections | 18925 | |
Completeness [%] | 97.5 | 96.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.7 | 293 | PEG 4000, Na Hepes, 2-propanol, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 10 (mg/ml) | |
2 | 1 | reservoir | PEG4000 | 18-20 (%) | |
3 | 1 | reservoir | sodium HEPES | 0.1 (M) | pH7.7 |
4 | 1 | reservoir | 2-propanol | 10 (%) |