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1K2B

Combining Mutations in HIV-1 Protease to Understand Mechanisms of Resistance

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X12B
Synchrotron siteNSLS
BeamlineX12B
Temperature [K]90
Detector technologyCCD
Collection date1999-10-08
DetectorADSC QUANTUM 4
Wavelength(s)1.037
Spacegroup nameP 21 21 21
Unit cell lengths50.759, 57.541, 60.841
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution8.000 - 1.700
Rwork0.215
R-free0.27500

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1daz
RMSD bond length0.011
RMSD bond angle2.183
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]8.000

*

1.760
High resolution limit [Å]1.7001.700
Rmerge0.0420.248
Number of reflections20000
<I/σ(I)>10.85.1
Completeness [%]99.098.4
Redundancy4.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29820-50% Saturated Ammonium Sulphate, 10% DMSO, 0.25M citrate/0.5M phosphate buffer, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoircitrate0.25 (M)
21reservoirphosphate0.5 (M)pH5-6.5
31reservoirDMSO10 (%)
41reservoirdithiothreitol10 (mM)
51reservoirammonium sulfate20-50 (%sat)
61dropprotein2-10 (mg/ml)

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PDB entries from 2024-05-15

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